PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004618.1_g000040.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 182aa    MW: 20146.7 Da    PI: 5.281
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004618.1_g000040.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-191059255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               +y+GVr +k +g+Wv+eIr+p   gk++r++lg++  +e+Aa+a++aa++ l+g
  Rmu_sc0004618.1_g000040.1 10 KYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYEAPEMAAAAYDAAALHLRG 59
                               8*****999.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MEEVHEPAVK YRGVRKRKWG KWVSEIREPG KKTRIWLGSY EAPEMAAAAY DAAALHLRGP  60
GVLLNFPEMV DSLPRPASSS PSDVQLTAQE AAMRFRRLPM GSVSTEVAGG SSGGAAPVTV  120
GLSPSQIQAI NESPLDSPKM WMQYMYMSHR DEALFFGEDM PSSMGFYDDH DEGLQHQSIW  180
DS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.12e-46ERF family protein