PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004618.1_g000053.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 196aa    MW: 21625 Da    PI: 4.7573
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004618.1_g000053.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-181867255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                y+GVr +k +g+Wv+eIr+p   gk++r++lg+f t+e+Aa+a++ a++ ++g
  Rmu_sc0004618.1_g000053.1 18 AYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAAAAYDVAALHFRG 67
                               69****999.**********8...557***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MGEPNSSSST VYGAATSAYR GVRKRKWGKW VSEIREPGKK TRIWLGSFET PEMAAAAYDV  60
AALHFRGREA RLNFPELVNY LPRPASSSPD DIRMAAHEAA LRLRSNDGDT TNSLGAAGHC  120
DVGSSSSSGV APVTVRLSPS QIQAINESPL DSPKMWMQMS EALMFEESMM FSNDFDDEGM  180
NSNQWENIQQ DSLWDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-65ERF family protein