PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004702.1_g000008.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 231aa MW: 26209.1 Da PI: 9.7009

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004702.1_g000008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.4	2e-17	90	179	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +fY++Y+ +GF rk+++ + +g i +r++ C+k+g+r+++ + + r +r t+++Ckak++v+ ++ g ++v+ ++ Rmu_sc0004702.1_g000008.1 90 RFYSAYSLALGFGFRKDTKGEV--KGMIRRRQWLCNKQGTRAKKWFIlDGRGRPPRRITKVNCKAKFRVNYNEiVGAYMVKAFV 171 5**************98887..999**********9987666789999************************** PP FAR1 83 leHnHela 90 eH+Hela Rmu_sc0004702.1_g000008.1 172 PEHSHELA 179 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
LCPASPISIL SLPHLSLAQL LCYLSSLIYP HLSETEASID NTTKGCSKEG TRADETRTDD 60 EAFNYVPDYR RLKVEDVKAM TLKTVEDAER FYSAYSLALG FGFRKDTKGE VKGMIRRRQW 120 LCNKQGTRAK KWFILDGRGR PPRRITKVNC KAKFRVNYNE IVGAYMVKAF VPEHSHELAT 180 GNQTAFIRSH RNVCKSDLPH ANTMSKVSIR PCHAYEYMVE QAGGYKTVGF T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-17	FAR1 family protein