PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004704.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 174aa    MW: 19167.2 Da    PI: 7.1815
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004704.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.25.1e-113152122
                               ---SS-EEEEEEE--TT-SS-E CS
                       WRKY  1 ldDgynWrKYGqKevkgsefpr 22
                               ldDgy+WrKYGqK+v+g+++p 
  Rmu_sc0004704.1_g000010.1 31 LDDGYRWRKYGQKVVRGNPNPS 52
                               59******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MDVGGIDVTP VVKPIREPQV VVHTPSEVDI LDDGYRWRKY GQKVVRGNPN PSARTSSHDT  60
LGPTTLNAPS RIRADENDTI SLDLGVGMSS TSENRSNNHL RLHSELAERQ THPSFNFKAV  120
QTTPAPSYYG VLNSGMNQYG SRENPSESRS IEIPPLNHSS YPYPQTMGRV LTGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.12e-54WRKY family protein