PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004753.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 189aa    MW: 21069.8 Da    PI: 10.0152
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004753.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox46.46.5e-153090256
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                                +R+ +t +q+++L+el+     + p  e+ ++++ +l     ++ ++V++WFqN+Ra+ek
  Rmu_sc0004753.1_g000006.1 30 NTRWLPTIDQIRILKELYDDkgVKSPIVEQVQRITLRLkwygLIENKNVFYWFQNQRAREK 90
                               58*****************6579***************999889****************9 PP
2Wus_type_Homeobox90.91.2e-292992264
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                               ++tRW Pt +Qi+iL+ely+ +G+++P  e++qrit +L+ yG ie+kNVfyWFQN++aRe+ k
  Rmu_sc0004753.1_g000006.1 29 SNTRWLPTIDQIRILKELYDdKGVKSPIVEQVQRITLRLKWYGLIENKNVFYWFQNQRAREKLK 92
                               789****************999***************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEPQNRHPAE DGGSNKAAES SPNMHCKQSN TRWLPTIDQI RILKELYDDK GVKSPIVEQV  60
QRITLRLKWY GLIENKNVFY WFQNQRAREK LKNNKLTSDV QVPKKRSGLV GGSINLNFGS  120
TSSAGVGGSI MDQRGEDHQE IKTLPLFPMH GEDIFGNMKT TSNGGGGSYI SLELSLSCEG  180
KAGKSFRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.16e-26WOX family protein