PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004768.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 193aa    MW: 20974.5 Da    PI: 4.9796
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004768.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-1895145155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                                s+y+GVr+++  g+W+AeIrdp     +   r +lg+f t+eeAa+a++  +++++g
  Rmu_sc0004768.1_g000004.1  95 SKYRGVRQRP-GGKWAAEIRDP-----HlaVRLWLGTFQTEEEAARAYDTKALEFRG 145
                                89********.9*********9.....778************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MKSSGSKMPK EQEHAIIVST LKRVIRGGVG TDNAPSQPPL PSTQLPATGV TDQVVIPFSD  60
CDDTCQVCKM GKDNCLGCGM FPPSEQDKGK KVKTSKYRGV RQRPGGKWAA EIRDPHLAVR  120
LWLGTFQTEE EAARAYDTKA LEFRGADRAK LNFPPSWETG TTSGAMADET KVQTSPVGES  180
SAAEEEEEEE MDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.11e-26ERF family protein