PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004790.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 229aa    MW: 26120.4 Da    PI: 8.9704
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004790.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.31.4e-12106157550
                    G2-like   5 rWtpeLHerFveaveqLGG..sekAtPktilelmk....vkgLtlehvkSHL 50 
                                 Wt e H+r veav qLGG  s k+tPk++l+lm+     +gLt + ++ HL
  Rmu_sc0004790.1_g000005.1 106 SWTLEHHRRVVEAVIQLGGlsSSKTTPKAVLKLMDeedrCQGLTTKMIAHHL 157
                                7******************545799*********83333579*********7 PP
2Myb_DNA-binding26.91.1e-08106158345
                                SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT.....TTS-HHHHHHHHH CS
            Myb_DNA-binding   3 rWTteEdellvdavkqlGgg.....tWktIartmg.....kgRtlkqcksrwq 45 
                                +WT e + + v+av qlGg      t+k++ + m      +g+t k++ ++++
  Rmu_sc0004790.1_g000005.1 106 SWTLEHHRRVVEAVIQLGGLsssktTPKAVLKLMDeedrcQGLTTKMIAHHLL 158
                                7*****************88*******************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MNISRFSVEG DRQETSSPKM FEWTLEHHKK CVDTFILLGG DKEKVGVHNA LKVELLSLAG  60
CCCRSFYLDF HISLLGVLQK SSDVLFSSNK VTLESLYVAP QKMSSSWTLE HHRRVVEAVI  120
QLGGLSSSKT TPKAVLKLMD EEDRCQGLTT KMIAHHLLGM YHLQKETQRL ITFGLAGGEE  180
ERELARRELR YLVFTGLLQQ RNRILYTKLK DPLLRQHLGL LKQVNIVDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.49e-07G2-like family protein