PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004947.1_g000031.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 159aa    MW: 17624.8 Da    PI: 9.7737
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004947.1_g000031.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP98.61.2e-3055125273
                        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 
                                + +kdrhsk++T++g+Rd RvRl a++a++f+d+qd+LG+dk+sk+++W +++ k+ai+el+   +++ ++c
  Rmu_sc0004947.1_g000031.1  55 TDRKDRHSKVYTAKGPRDHRVRLAAHTAIQFYDVQDRLGYDKPSKAVDWVIKKVKAAIDELPPW-NPNINFC 125
                                679**********************************************************988.4444566 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MEYAGRKMGE SHNNLHHRAM TSSSAASRLG LGIRAASSST ASEIVGARGH ILRATDRKDR  60
HSKVYTAKGP RDHRVRLAAH TAIQFYDVQD RLGYDKPSKA VDWVIKKVKA AIDELPPWNP  120
NINFCSDNIF SDGADIRRVG HAEHKPPFLD GGDSEFFVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.23e-38TCP family protein