PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005223.1_g000019.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 234aa MW: 26945.9 Da PI: 8.4754

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005223.1_g000019.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.2	2e-21	44	129	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 +fYn+YA e+GFs+++s++ +sk+ ei++++f+C keg+++++ +r++ rtgC ak+ k+ ++ ++vt++ + Rmu_sc0005223.1_g000019.1 44 EFYNKYAFEAGFSIQRSTTARSKDGYEIIRQEFCCRKEGHSNKKMPL---PKRRKGIIRTGCLAKIAAVKR-SSIYVVTQFMEA 123 6*************************************9998766...78888999****99999.9******* PP FAR1 85 HnHela 90 HnH+l+ Rmu_sc0005223.1_g000019.1 124 HNHPLT 129 **96 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MFQAMNLWSV SCSAETTNVY IPQVADVLKP AKSLEFRTLD EVFEFYNKYA FEAGFSIQRS 60 TTARSKDGYE IIRQEFCCRK EGHSNKKMPL PKRRKGIIRT GCLAKIAAVK RSSIYVVTQF 120 MEAHNHPLTA PERVHLLLSH HQVSNDTKCL TMELGLVNIP THQQISLLEV KSLGIENMGC 180 TGKDIYNYGR DKREELKGHD GDMLYAHFLS QQEKNSFFTF KIEEDNDNRI KHCF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-22	FAR1 family protein