PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005376.1_g000012.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 448aa MW: 48784.5 Da PI: 6.5141

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005376.1_g000012.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.2	1.4e-16	218	271	3	56
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++kr+rr+ +NRe+ArrsR+RK+a++ Le+ + +L eN+aL k+l + ++ Rmu_sc0005376.1_g000012.1 218 DVKRARRMLSNRESARRSRRRKQAQMTDLETQAGQLRVENSALLKQLTDVNHKY 271 78******************************************9887766655 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MHSAFQADEI SDINDTFWAS STSLPMNRSD SEWAFEQFLE EVVSAPPPPP PPPAADQLTV 60 SSVASAHSST SKREDVDEEV VEIKKPDRHL NCPPPPPPST VPINSDQYQR ELLKSKLDLA 120 CAAVALTRAS SLKPVGSGNV AQTQSILPQP SQVTSAVHNK AAGYGLPQSE ADTSPLGIPA 180 LPAIQKKAQT TSGSSKDDSD DDDLEGDIEI TENMDPADVK RARRMLSNRE SARRSRRRKQ 240 AQMTDLETQA GQLRVENSAL LKQLTDVNHK YDNSVVDRRI LEANIETLRA KVKMAEESVK 300 RKTGINPLLL AMSNVPNVPR TSMASLGNPM DTSANASVPM QPTSNHLFHP VAPSINTPPH 360 HQRLDTSFPG NPSIPLVGNQ QSTVGQPIVR GSNTTEVPSV QHTASIDHMH QQQQQQQHQQ 420 QLQPGVNPCE ALPVWNPQIP HAVPKNKK

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MHSAFQADEI SDINDTFWAS STSLPMNRSD SEWAFEQFLE EVVSAPPPPP PPPAADQLTV  60
SSVASAHSST SKREDVDEEV VEIKKPDRHL NCPPPPPPST VPINSDQYQR ELLKSKLDLA  120
CAAVALTRAS SLKPVGSGNV AQTQSILPQP SQVTSAVHNK AAGYGLPQSE ADTSPLGIPA  180
LPAIQKKAQT TSGSSKDDSD DDDLEGDIEI TENMDPADVK RARRMLSNRE SARRSRRRKQ  240
AQMTDLETQA GQLRVENSAL LKQLTDVNHK YDNSVVDRRI LEANIETLRA KVKMAEESVK  300
RKTGINPLLL AMSNVPNVPR TSMASLGNPM DTSANASVPM QPTSNHLFHP VAPSINTPPH  360
HQRLDTSFPG NPSIPLVGNQ QSTVGQPIVR GSNTTEVPSV QHTASIDHMH QQQQQQQHQQ  420
QLQPGVNPCE ALPVWNPQIP HAVPKNKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	233	240	RRSRRRKQ
2	235	240	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02640.2	2e-43	bZIP family protein