PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005388.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 129aa    MW: 14639.9 Da    PI: 4.7533
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005388.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.94.8e-10631173896
                                EEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                         B3  38 ledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                                + +   +sWe+++  +    + v +  W+ Fv++n+Lk+gD ++F+l++ ++++ v+kv
  Rmu_sc0005388.1_g000001.1  63 VLSFGDKSWEMTY--NEI--KLVDRHLWRTFVDDNNLKAGDGCIFELTRCDSTKVVFKV 117
                                5566779******..444..4778888*******************9865666555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MEDSAQFRAT PTIELHGDEF WPLSGKPFFD IILTKSHVKP IYEMEIPAKL DPVLPAGASV  60
PMVLSFGDKS WEMTYNEIKL VDRHLWRTFV DDNNLKAGDG CIFELTRCDS TKVVFKVQIL  120
RGDIPAELV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.14e-07B3 family protein