PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005394.1_g000009.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 258aa MW: 29700 Da PI: 8.9321

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005394.1_g000009.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55	2.8e-17	121	229	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkak 65 kfY+ Y++ +GFs+r++++ + r++ +++r++vCsk+gk++ + kk +++ r + +r+gC a Rmu_sc0005394.1_g000009.1 121 KFYHLYSRVIGFSTRRDRKVRAYRSEFVIRREWVCSKQGKATIKVKKqgvkekgnspiqaekkkmkRNQCPRGKRYSRVGCMAA 204 6***************************************999999*******998766555556688999*** PP FAR1 66 lkvkkek.dgkwevtkleleHnHel 89 + ++ k ++k+ v+k++++HnH++ Rmu_sc0005394.1_g000009.1 205 FGIRYCKeRKKYFVSKFVTNHNHDV 229 *999*************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MQVNMRTTKQ VYATLTICTT ARLRYTDHLY HNSLLSDEEV SDDDCLLRIG EDKEGLFCDG 60 GEKGLGQTSE IGNDKCYMMD MEMLEGMNVG ECVDLNGKDY SNLNMDDMKD VVFSSVCEVE 120 KFYHLYSRVI GFSTRRDRKV RAYRSEFVIR REWVCSKQGK ATIKVKKQGV KEKGNSPIQA 180 EKKKMKRNQC PRGKRYSRVG CMAAFGIRYC KERKKYFVSK FVTNHNHDVA VSEEVQFLRS 240 HRGVNDSVIA QVEALQKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-14	FAR1 family protein