PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005580.1_g000009.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 146aa    MW: 16618 Da    PI: 10.1142
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005580.1_g000009.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.28.6e-1179143267
                       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklk 67 
                                 Y++Y+  +GF  rk+++ +   +g+i +r++ C+k+g+r+++    + + r++r+ tr++Ckak++
  Rmu_sc0005580.1_g000009.1  79 LYSAYSLALGFGFRKDTKGEA--EGTIRRRQWLCNKQGTRAKKWFIlDGRGRTPRKITRVNCKAKFT 143
                                7**************997776..999**************99876667899*************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MEMGTNSDPS ISLHATRHKT GQTRLERIDG SCGFWVCGIE IEEQGFGDWD LTLRFGVFGL  60
KVEDVKAMTF KTVEDAERLY SAYSLALGFG FRKDTKGEAE GTIRRRQWLC NKQGTRAKKW  120
FILDGRGRTP RKITRVNCKA KFTTSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-07FAR1 family protein