PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005584.1_g000026.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 155aa    MW: 16526.2 Da    PI: 4.6383
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005584.1_g000026.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.000536893221
                               EETTTT......EEESSHHHHHHHHH CS
                    zf-C2H2  2 kCpdCg......ksFsrksnLkrHir 21
                               +C++Cg       sF+  s+L+rHi 
  Rmu_sc0005584.1_g000026.1 68 RCKYCGtvfnanSSFNGTSTLRRHIE 93
                               6*****77777777777777777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MATFGSELVA ASLAAEATKG CGATDGGTTT DGGAAASSQV DTAKRKMEDS RWEQDGKEDV  60
VGHCSKARCK YCGTVFNANS SFNGTSTLRR HIENVCKQYP SRVDFEEGQK TLASDGSTNS  120
VVMRQWSPDA CTEATVVMTV MDELQFSQVD TTTIT