PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005592.1_g000024.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB_related

Protein Properties

Length: 650aa MW: 71278.2 Da PI: 5.3623

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005592.1_g000024.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.7	8.2e-11	600	648	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ E++ l +v+++G g+Wk+I Rt+ ++k++w++ Rmu_sc0005592.1_g000024.1 600 KRWSLHEEDTLRTGVQKYGRGNWKLILDAYRdvfVERTEVDLKDKWRNM 648 59******************************99*********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MDLDADVSRW VLELLLRDRD KESVAKRVLA AVPLSNQDWR LKKTVLLRTI ESEVLDEASV 60 TEAILESLES IEALDRGQGI PVTDSMRAAY CAVATECTVK FLVCFGGKPS GKYMEAVDRI 120 WRGRVKVLEE SEGCELVSGE LRERRDEVEA GIWDVKVSKK LASMNSRNDA LRLVAAYVKE 180 ALAMLGPPFI AWAVRFNMQK GSLGLEGDEV AVEKDGNVGD GQVRMANGAE LEVQTANGAD 240 LEVPRANGVE LGDGSKLEVS GANVRDASEL EAQRGANVNS GSEQAQRANG VTVNSGSEQE 300 AQRANVNSGS ELEAQRVNGA NDVSDRSEQE AQRLNGANVS DASEQEAHDT NVVGVGRSQR 360 SGHRGVLSLE PATKEKETPR SRALRRRHGP VKIRDAEDVG MEASAGIYNS VSSAEVRKVQ 420 EELKSSVLAL QAVVTDPLPY ALRVSEIVRS ELGMKPVDHV SGENGGAANP SVERNSQPDQ 480 SNNDNHGNQT SHQNDVPQPS EKENDGPNLS VDKGKGTEYV GTGDVNPGNP SCSYQNNVSR 540 AGLMERNSTA HTYEWEDSLG MSPERTNSKG RLHLPSPKRN AVSPLKKYED KRFSKRRKVK 600 RWSLHEEDTL RTGVQKYGRG NWKLILDAYR DVFVERTEVD LKDKWRNMTK

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MDLDADVSRW VLELLLRDRD KESVAKRVLA AVPLSNQDWR LKKTVLLRTI ESEVLDEASV  60
TEAILESLES IEALDRGQGI PVTDSMRAAY CAVATECTVK FLVCFGGKPS GKYMEAVDRI  120
WRGRVKVLEE SEGCELVSGE LRERRDEVEA GIWDVKVSKK LASMNSRNDA LRLVAAYVKE  180
ALAMLGPPFI AWAVRFNMQK GSLGLEGDEV AVEKDGNVGD GQVRMANGAE LEVQTANGAD  240
LEVPRANGVE LGDGSKLEVS GANVRDASEL EAQRGANVNS GSEQAQRANG VTVNSGSEQE  300
AQRANVNSGS ELEAQRVNGA NDVSDRSEQE AQRLNGANVS DASEQEAHDT NVVGVGRSQR  360
SGHRGVLSLE PATKEKETPR SRALRRRHGP VKIRDAEDVG MEASAGIYNS VSSAEVRKVQ  420
EELKSSVLAL QAVVTDPLPY ALRVSEIVRS ELGMKPVDHV SGENGGAANP SVERNSQPDQ  480
SNNDNHGNQT SHQNDVPQPS EKENDGPNLS VDKGKGTEYV GTGDVNPGNP SCSYQNNVSR  540
AGLMERNSTA HTYEWEDSLG MSPERTNSKG RLHLPSPKRN AVSPLKKYED KRFSKRRKVK  600
RWSLHEEDTL RTGVQKYGRG NWKLILDAYR DVFVERTEVD LKDKWRNMTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	5e-17	MYB_related family protein