PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005621.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 237aa    MW: 25726.7 Da    PI: 5.4325
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005621.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-20102153156
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                s+y+GVr+++  g+W+AeIrdp+    r  r++lg+f taeeAa+a++ a+ +++ge
  Rmu_sc0005621.1_g000003.1 102 SKYRGVRQRP-GGKWAAEIRDPR----RaVRVWLGTFQTAEEAARAYDTAAIEFRGE 153
                                89********.9*********82....48*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MESSGTKMPS HSGGLPKEQE HAIIVSALKQ VVRGGTTQPP PPQLHYASSS LPPTGGTDQV  60
VIPFSDCDAC QVCNMKMDDC LGCGLFRPSE QDEGKGKKMK TSKYRGVRQR PGGKWAAEIR  120
DPRRAVRVWL GTFQTAEEAA RAYDTAAIEF RGERAKLNFP LSSEAGTTTT GAALTRQSME  180
TGEVNQVTAS SVKSANQEEG QSSDVKDEDI DRFVWEMLKN DDGGEDLSTR VNSNLLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.15e-27ERF family protein