PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005651.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 147aa    MW: 16990.3 Da    PI: 7.497
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005651.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.74.3e-14131406125
                        NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvka.....eekewyfFskrdkkyatgkrknr.atks 80 
                                 FhPtd++l+  yL +++++ +   +++++e++iy +    Pwd+ + +++     +++ +yfFs+ +k  +    ++r   + 
  Rmu_sc0005651.1_g000005.1  13 TFHPTDSDLLGSYLYNRIKSPTPIGKQTFPEIEIYGTtglPPWDIWR-IYEpskfpHQNYIYFFSRVKKLGSC--CSRRiGCDG 93 
                                5*******************996555678888887654448****63.2222233355677888887776544..444435689 PP

                        NAM  81 gyWkatgkdkevlsk.kgelvglkktLvfykg.rapkgektdWvmhe 125
                                g+W++t   k+++++  +el g  + + + ++ ++   +++ W+m++
  Rmu_sc0005651.1_g000005.1  94 GTWRETEAAKPIYVSgIEELYGKLRKFRYENNkDKAFEHHAAWLMDD 140
                                **************8445567888888888552444457899*9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MSLEDLEVGV VKTFHPTDSD LLGSYLYNRI KSPTPIGKQT FPEIEIYGTT GLPPWDIWRI  60
YEPSKFPHQN YIYFFSRVKK LGSCCSRRIG CDGGTWRETE AAKPIYVSGI EELYGKLRKF  120
RYENNKDKAF EHHAAWLMDD DTLKASA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.14e-07NAC family protein