PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005697.1_g000023.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 236aa    MW: 26062.5 Da    PI: 4.7624
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005697.1_g000023.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.78.2e-183091257
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               ++R+t+t++q+++L+el++    ryp+ e+++e+  +l    ++++++V++WFqN +a+ek+
  Rmu_sc0005697.1_g000023.1 30 STRWTPTPDQIRILKELYYDkeVRYPTPEQIQEIYLHLkqygQIEDKNVFFWFQNLKAREKQ 91
                               58****************95459*************************************97 PP
2Wus_type_Homeobox987.5e-322993265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRWtPtp+Qi+iL+ely+ + +r P+ e+iq+i  +L++yG+iedkNVf+WFQN kaRe+qk+
  Rmu_sc0005697.1_g000023.1 29 SSTRWTPTPDQIRILKELYYdKEVRYPTPEQIQEIYLHLKQYGQIEDKNVFFWFQNLKAREKQKK 93
                               789***************98799****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MELQTQQPTE DGGSNQAVGS SANTPFWQSS TRWTPTPDQI RILKELYYDK EVRYPTPEQI  60
QEIYLHLKQY GQIEDKNVFF WFQNLKAREK QKKRLNRNVR VPMGTSSSSV GGSINLNFWS  120
TSSTDADGSI DLNFGSWVGY SVDSYSSSPF NTNTSTSSFG TKGGQTFMEQ RGEDHQEIET  180
LPLFPMHGED ILGNLKSTSE GGSAYGYYSG GSGCYNGGSH ISLELSLNPS GAADLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-28WOX family protein