PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005733.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 146aa    MW: 17289.2 Da    PI: 10.8688
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005733.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.84.4e-19118353128
                        NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                ++++ew+fF++ ++ y++ k+ +ratk+g Wk+ g++++v+++  +++++g +k L+fy g+     kt+Wvmhey+l
  Rmu_sc0005733.1_g000006.1  11 KSNEEWFFFTQLNR-YKNTKNISRATKEGAWKSNGNKRDVTKEhnSESVIGKRKLLTFYLGE----IKTNWVMHEYSL 83 
                                35669999999877.778899********************98666677**********543....589*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MLLCTAKSRS KSNEEWFFFT QLNRYKNTKN ISRATKEGAW KSNGNKRDVT KEHNSESVIG  60
KRKLLTFYLG EIKTNWVMHE YSLLSRAKNQ LQMRLLMVTE PELEGQLQMG RLLNATELPL  120
MLAKQRKEMK VLQAKWVVKQ RRVEER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-15NAC family protein