PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005733.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 126aa    MW: 14327.8 Da    PI: 4.9441
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005733.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.61.1e-1471124148
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiy..kvePwdLp 48 
                                lp+GfrF+Ptdeelv++yL++k+++++     +++++i+e+d y  k+ePw+Lp
  Rmu_sc0005733.1_g000007.1  71 LPVGFRFQPTDEELVDYYLRNKMHDNDgidsEQVDSIISEIDFYdyKYEPWELP 124
                                79***********************999876566668****9862267*****9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MSSGSSSTNL TRNGRSPSVL KEAQRKEDGS PSRELVLCRL KNYGSHGLAH DMVITSSNSK  60
SSTDYSLLNR LPVGFRFQPT DEELVDYYLR NKMHDNDGID SEQVDSIISE IDFYDYKYEP  120
WELPAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02230.13e-13NAC family protein