PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005776.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 295aa    MW: 33452.3 Da    PI: 4.412
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005776.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM27.96.5e-091583269
                        NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvkaeekewyfFskrdkkya 69
                                pG+rF P ++elv +yLk+ ++g+k++  +  + ++d+y + ePw++ +    e+++   +s r+k++ 
  Rmu_sc0005776.1_g000003.1 15 LPGVRFCPMEDELVLFYLKPLLSGEKVPGRNSvVFDCDLYGHqEPWEIWE-GGRERRQSTSWSARQKQSG 83
                               59************************8876654999****8879****63.2333445555666666554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MQQEFAMEES GGNQLPGVRF CPMEDELVLF YLKPLLSGEK VPGRNSVVFD CDLYGHQEPW  60
EIWEGGRERR QSTSWSARQK QSGVRLRPLR SPRTLGDMGG LQDQKTKRLE AQQGHLLLHP  120
TQEDEFHRLA HTPDRWKWHL EGRRLRQASK IFGDWSCGWL EEKTYLQEQS IGAMVEMEDL  180
LAVNGATSNM EMAEENVLNN TLLHTPASSL SAAYDGIDMP YLSMENGCTD SAGSNNVCGG  240
SIGFQDGAYW PESLVEVLAE EQQKKADGDC SDWLESISFS PEENNFLWSE VQWCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.14e-06NAC family protein