PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005791.1_g000017.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 90aa    MW: 9872.98 Da    PI: 10.2242
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005791.1_g000017.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP74.92.4e-233583250
                        TCP  2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieW 50
                                g+kd+hsk++T +g+RdR++Rl+a++a++f+d+qd+LG+d++sk ++W
  Rmu_sc0005791.1_g000017.1 35 SGQKDSHSKVSTTKGPRDRSIRLVAHTAIQFYDMQDQLGYDQPSKVVDW 83
                               689********************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MAMINMGGGS HEGGTASSST TSEIVEAQGH ILRASGQKDS HSKVSTTKGP RDRSIRLVAH  60
TAIQFYDMQD QLGYDQPSKV VDWPRRTRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.12e-28TCP family protein