PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006010.1_g000013.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HB-other
Protein Properties Length: 102aa    MW: 11647.4 Da    PI: 9.3543
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006010.1_g000013.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox17.76.3e-067599933
                               HHHHHHHHHHHHHSSS--HHHHHHH CS
                   Homeobox  9 keqleeLeelFeknrypsaeereeL 33
                                eq+e+Le+l+ ++++ps  +r++L
  Rmu_sc0006010.1_g000013.1 75 VEQVEALERLYSECPKPSSIRRQQL 99
                               69**********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MSPTKLSFDE LSGQWVDLAS GINFWVSQFC SLSCQTRFNT PLSVTRLFVV GVVVEELFRN  60
GKGVMDNGKY VRSRVEQVEA LERLYSECPK PSSIRRQQLI KK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.32e-16HD-ZIP family protein