PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006047.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 113aa    MW: 13434.5 Da    PI: 9.9955
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006047.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.92.4e-101295385
                               EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE- CS
                         B3  3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkld 85
                               k+l+p dv+  +rl lpk+ a+     ++ +++ +++ d++ r++ ++l++r++++   ++  k W++Fv+++g +eg  + ++++
  Rmu_sc0006047.1_g000008.1 12 KKLKPTDVS--DRLALPKHMAAVLpPAQPGSEIPIRVLDLWHRVYHFRLSVRRGRRLkpVFQYKEWQDFVRDHGAEEGNLIYLRRE 95
                               777777776..579******97669777889999***************88666655766667******************99965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MENQYQSRCP VKKLKPTDVS DRLALPKHMA AVLPPAQPGS EIPIRVLDLW HRVYHFRLSV  60
RRGRRLKPVF QYKEWQDFVR DHGAEEGNLI YLRREVNADA GTEYRIVLYK EYL