PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006047.1_g000011.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 248aa    MW: 28330.1 Da    PI: 8.1391
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006047.1_g000011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.31.8e-151422311299
                                HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                         B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                                + +  +++ +fa+eh   + +s  +tl+ ++ ++W+ ++++  +s++     v ++GWk F ++n+L++ D++vF+++++++f 
  Rmu_sc0006047.1_g000011.1 142 RCSGAYISPSFAKEHVCRPGTSCNVTLQISKEKVWTAQCTVGENSEHklyaRVSGAGWKAFKEDNHLEVHDVCVFEFIEERTF- 224
                                4556799********777788889***************9966666655555566*********************9986666. PP

                                .EEEEE-S CS
                         B3  92 lvvkvfrk 99 
                                 +v+++r+
  Rmu_sc0006047.1_g000011.1 225 -KVSIIRA 231
                                .9999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MAESIFLKAP NCGTWWPIEV KRSVRGGRMW LHKGWQDFAN FYSLDQGYFA LFTYEGEHSH  60
FLVRLFHWND MEIDYPIHGG GVPKRKRTGG NRNTPPAYLE ARTSPTSSGS STDENQNDLS  120
TATSFKSDKL LLMLRMTATY IRCSGAYISP SFAKEHVCRP GTSCNVTLQI SKEKVWTAQC  180
TVGENSEHKL YARVSGAGWK AFKEDNHLEV HDVCVFEFIE ERTFKVSIIR AKVKINKQDE  240
ESEDKLMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.11e-10B3 family protein