PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006065.1_g000026.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HSF
Protein Properties Length: 93aa    MW: 10742.2 Da    PI: 4.1564
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006065.1_g000026.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind83.33.5e-261775260
                               HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
               HSF_DNA-bind  2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60
                               Fl+k+y++++d++++ l+sw++ +nsfvv++  +fa+++Lpk+Fkh+nf+SFvRQLn+Y
  Rmu_sc0006065.1_g000026.1 17 FLNKTYDMVDDPSTDYLVSWTDANNSFVVWNDAQFARDLLPKFFKHNNFSSFVRQLNTY 75
                               9********************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MEDAAAMINS ATSIPPFLNK TYDMVDDPST DYLVSWTDAN NSFVVWNDAQ FARDLLPKFF  60
KHNNFSSFVR QLNTYVGFPF PPFFPILILF EFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17750.15e-32HSF family protein