PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006069.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family AP2
Protein Properties Length: 219aa    MW: 24033.3 Da    PI: 9.0634
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006069.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-1774133155
                        AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                s y+GV++++++gr++A+++d  ++n+   k+ k+++lg ++ +e Aa+a++ a++k++g
  Rmu_sc0006069.1_g000007.1  74 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 133
                                57*******************766644468557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MASSSSDPGP KTESGSGSGG GAEASEAAAA AAAAVATDQQ LLYRGLKKAK KERGCTAKER  60
ISKMPPCAAG KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA  120
ARAYDLAALK YWGPGTLINF PVTDYTRDLE EMQNVSREEY LASLRRCGYL RTYLNLIAVT  180
LLILDFSLAG RAVASLEECL NIARSQGMVY IYTLLVCII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.26e-77AP2 family protein