PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006103.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 175aa    MW: 19277.9 Da    PI: 8.229
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006103.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.20.000711341654
                               HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                        HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                               iN  +++Lr l+P +     +K++Ka+ L ++++ +k+L
  Rmu_sc0006103.1_g000001.1  1 INAHLSTLRGLVPRN-----EKMDKAALLAEVIRQVKEL 34
                               899**********98.....8***********9998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
INAHLSTLRG LVPRNEKMDK AALLAEVIRQ VKELKKDSLE SSKGFLIPID ADEVKVEHYD  60
SGVGDGIISV RASICCEYRS ELLSDLKEAL DSLHLKMVKA EMATLGNRVH NVFVLTGYNK  120
GNNNAEAYQL LASSVHHALS SVLDKASISP EYSPRTTLPT KRRRTSYFDT SSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-25bHLH family protein