PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006124.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Trihelix
Protein Properties Length: 323aa    MW: 36561.5 Da    PI: 9.972
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006124.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix58.91.3e-1816104186
                   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 
                                +Wt++e + Li a+r+++ +lrr++lk ++W++v+++    +     +++ qC++k+e+l+kr++++k+++++   + ss++++
  Rmu_sc0006124.1_g000002.1  16 CWTQDEARSLILAYRDRWFALRRTNLKSADWDHVAAATaaeAPSSPPKTALQCRHKMEKLRKRFRAEKQRASGYPGRFSSSWAL 99 
                                8************************************96444444589*************************9999******* PP

                   trihelix  82 fdqle 86 
                                f+ ++
  Rmu_sc0006124.1_g000002.1 100 FHLMD 104
                                **998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MSAALPTKPR RVPPPCWTQD EARSLILAYR DRWFALRRTN LKSADWDHVA AATAAEAPSS  60
PPKTALQCRH KMEKLRKRFR AEKQRASGYP GRFSSSWALF HLMDEMESGP DPGLDSGGEF  120
GGGFSLKARN LVKFNGNVGR DFSPDVDENS SFYSEAEDYV NQGFRPKSNG KTDVNLKHSF  180
RQHGDYGVDI RSDRDFVPAG FRPKSSGIVD GNAKRNVRFK EFDGYSCLSG SKFVDKSSVV  240
GIKRDMDPVE DLASSIMRLG EGFVRMEKMK MEMTMEIEKM RMEMELKRNE AMIESHQQIV  300
DAFVNALLER KRKKKAKVES SHA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1310314RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.11e-27Trihelix family protein