PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006171.1_g000017.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 143aa    MW: 15850.7 Da    PI: 4.2697
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006171.1_g000017.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox47.23.9e-153996354
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHH CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRak 54
                               +R+t+t++ql++L+el++    + p+ e+++e+  +l    ++++++V++WFqN +a+
  Rmu_sc0006171.1_g000017.1 39 NRWTPTPDQLRILQELYYDkvLKCPTPEQIQEICLNLqqygQIEDKNVFFWFQNLKAR 96
                               7****************96679********************************9998 PP
2Wus_type_Homeobox88.85.6e-293796260
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaR 60
                               +++RWtPtp+Q++iL+ely+ + l+ P+ e+iq+i  +L++yG+iedkNVf+WFQN kaR
  Rmu_sc0006171.1_g000017.1 37 TNNRWTPTPDQLRILQELYYdKVLKCPTPEQIQEICLNLQQYGQIEDKNVFFWFQNLKAR 96
                               679***************9868899**********************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MEPRTLQLIE LQAQQPTEEG GGIQAAGSSA NTPIRPTNNR WTPTPDQLRI LQELYYDKVL  60
KCPTPEQIQE ICLNLQQYGQ IEDKNVFFWF QNLKARIAAH AMPGTCCAEL SYGYYSGGWD  120
DNNGGSCISF ELSLNSSGAA DMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.17e-23WOX family protein