PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0006214.1_g000011.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 475aa MW: 51819.2 Da PI: 7.2533

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0006214.1_g000011.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.5	5.3e-32	286	339	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Rmu_sc0006214.1_g000011.1 286 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 339 9****************************************************7 PP
2	Myb_DNA-binding	46.7	7.5e-15	287	338	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Rmu_sc0006214.1_g000011.1 287 RMRWTSSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 338 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MPHKGILESL NPIPDLSLHI SPPNSAPNEP ADSAAFNIWR CRDNTDVHDG GLVKSYSGDA 60 ATTPLAADTE LSLANPTSAS EAESDSNSWK MMKSSYFARD QQQAAAEKHN NISHGLSMLD 120 VAELGIKPIK GIPVYNTTPA AANCSFPFSP PNLDPSRDIS AAANSKLCFY QTPPPYLSPA 180 APFRPGAAAA MGAGVGGGFE SRFNGITMDS LRVPQQHLQY LNHHHHQQQQ LLQHQHQCGV 240 GVGIGIGGHH HHHHHHHGDF SNTNGFIMRS RFTPKSYQSK RNMRAPRMRW TSSLHARFVH 300 AVELLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV KNTDKPVASS DGSGDEDLMS 360 TTTTTHHQNS ANGLLNQRGG SNASLNLEQD TEHPSSNLWG NSSSRGAWVQ ASSRDLNGHS 420 QHRSPSGNLF HHHEGSDFAQ SRSSFVDLSN GDLIKNPSLE FSLGRPDWHS KEVLD

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MPHKGILESL NPIPDLSLHI SPPNSAPNEP ADSAAFNIWR CRDNTDVHDG GLVKSYSGDA  60
ATTPLAADTE LSLANPTSAS EAESDSNSWK MMKSSYFARD QQQAAAEKHN NISHGLSMLD  120
VAELGIKPIK GIPVYNTTPA AANCSFPFSP PNLDPSRDIS AAANSKLCFY QTPPPYLSPA  180
APFRPGAAAA MGAGVGGGFE SRFNGITMDS LRVPQQHLQY LNHHHHQQQQ LLQHQHQCGV  240
GVGIGIGGHH HHHHHHHGDF SNTNGFIMRS RFTPKSYQSK RNMRAPRMRW TSSLHARFVH  300
AVELLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV KNTDKPVASS DGSGDEDLMS  360
TTTTTHHQNS ANGLLNQRGG SNASLNLEQD TEHPSSNLWG NSSSRGAWVQ ASSRDLNGHS  420
QHRSPSGNLF HHHEGSDFAQ SRSSFVDLSN GDLIKNPSLE FSLGRPDWHS KEVLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-60	G2-like family protein