PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006267.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 231aa    MW: 26376.3 Da    PI: 10.7305
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006267.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP69.41.2e-21175224150
                        TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieW 50 
                                a+g+kd+hsk++T + +RdR++Rl+a++a++f+d+ d+LG+d++sk ++W
  Rmu_sc0006267.1_g000006.1 175 ATGRKDSHSKVCTTKRPRDRSIRLVAHTAIQFYDMHDRLGYDQPSKVVDW 224
                                589*********************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MGGGDSTSGS TKRRRRRYSR KSQSSSLSLG AVPPAFDHPP KRSAPPPKSK FVNTNIDDLP  60
DNVLVDILSQ LPSYEYVYEY SSFVCKRWRY LMSYLYYSGR YLLRHKQPPP LTLINKRGET  120
FPIKLIPSSP KFLSMLFKRL MSVMSLTCEP VVVGATASFS TASEIVEAQG HIVRATGRKD  180
SHSKVCTTKR PRDRSIRLVA HTAIQFYDMH DRLGYDQPSK VVDWPRRTRR T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11217KRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.12e-27TCP family protein