PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0006336.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 403aa MW: 44100.2 Da PI: 6.8862

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0006336.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.5	1.5e-13	348	399	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe + +L +eN Lk+ l el+ + Rmu_sc0006336.1_g000004.1 348 RRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENANLKQALAELEMKR 399 79****************************************9999998665 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MGGVSESEMM SHGKEELPVQ SDQYAKNNQL FTSLGRQSSI YSLTLDEFQH TFSENGKNFG 60 SMNMDEFLNS IWIAEENQAI NSTHHNNSNN LNPNHINNNV QQPALNEVTM EKKGVIAKQP 120 SLPRQGSLTL PAPLCRKTVD EVWSEMHKEQ KAQAQQQNSN HNNSNDGAQN SEYVPRQPTF 180 GEMTLEDFLV KAGVVREPDS MSVVPLPPQP QQQPQQYGIV GQSFVMGMGA NAGASTSTTP 240 VLPNYQTIPQ GGAPVGESSG YVTNGKRNGA YPPPPPQAVC FGGRVVNGGG GYAPTQPIGM 300 ATSVSPVSSD GMCASQIENS GGQYAMDMGA LRGRKRIIDG PVEKVVERRQ RRMIKNRESA 360 ARSRARKQAY TVELEAELNQ LREENANLKQ ALAELEMKRK QQV

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MGGVSESEMM SHGKEELPVQ SDQYAKNNQL FTSLGRQSSI YSLTLDEFQH TFSENGKNFG  60
SMNMDEFLNS IWIAEENQAI NSTHHNNSNN LNPNHINNNV QQPALNEVTM EKKGVIAKQP  120
SLPRQGSLTL PAPLCRKTVD EVWSEMHKEQ KAQAQQQNSN HNNSNDGAQN SEYVPRQPTF  180
GEMTLEDFLV KAGVVREPDS MSVVPLPPQP QQQPQQYGIV GQSFVMGMGA NAGASTSTTP  240
VLPNYQTIPQ GGAPVGESSG YVTNGKRNGA YPPPPPQAVC FGGRVVNGGG GYAPTQPIGM  300
ATSVSPVSSD GMCASQIENS GGQYAMDMGA LRGRKRIIDG PVEKVVERRQ RRMIKNRESA  360
ARSRARKQAY TVELEAELNQ LREENANLKQ ALAELEMKRK QQV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	282	290	GGRVVNGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36270.1	1e-107	bZIP family protein