PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006417.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 454aa    MW: 51046.8 Da    PI: 7.2175
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006417.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1064.6e-3381591128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........................kvka..eekew 58 
                                +ppG+rFhPtde l+ + L++k + k+ e+ ++i+ ++++k+eP++Lp+                        +  +  ++ +w
  Rmu_sc0006417.1_g000005.1   8 VPPGYRFHPTDERLLRD-LEEKNRCKDSETPTIIPVIEMCKHEPHELPElaftraqnlgrkffsffffyfawaE--SwdSQGKW 88 
                                69*************66.999999999999899***************66899999999999999999887542..2325569* PP

                        NAM  59 yfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                yfF++rd kya+++r+nr+t +g+Wk tgk +++++  +++++g k++L+f k  +p+++kt Wv+hey l
  Rmu_sc0006417.1_g000005.1  89 YFFAPRDYKYANSTRSNRTTGEGFWKPTGKVRDIKAPgSKAVIGRKRILTFQKHGEPNPQKTGWVIHEYYL 159
                                ************************************9666779**************************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MSCGDFIVPP GYRFHPTDER LLRDLEEKNR CKDSETPTII PVIEMCKHEP HELPELAFTR  60
AQNLGRKFFS FFFFYFAWAE SWDSQGKWYF FAPRDYKYAN STRSNRTTGE GFWKPTGKVR  120
DIKAPGSKAV IGRKRILTFQ KHGEPNPQKT GWVIHEYYLI EAHSDRPKQI GDFVVCCLKY  180
KSNNPDHDKD APFFDQGSTC CSMASNVENQ AEENWSSIEP VNVVPIPNGN GDEAETGGGM  240
ITEEEEYLAL KELENALQSP IGNPHEFQGT QTDPCHIDKN DLSTSVEGRP DKSNLSDMIE  300
EWRLGVGFRL ATIKSLPDGC LNTIAWEVRR EGFGLWYWQV GQRKVSGGIS GHGCLFFYTG  360
TAHPLRSSRS RVGVVLELLG AAVLNWWSRL MGGLCQGAAS VMARGTVGCL LAELGGRTLV  420
SWLRSCRRTA PTCTGNKWVK EMMSGLRSTI SCWA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66300.12e-27NAC family protein