PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006420.1_g000019.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 177aa    MW: 19585.8 Da    PI: 4.8055
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006420.1_g000019.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox49.47.7e-1648104454
                                -SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHH CS
                   Homeobox   4 RttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRak 54 
                                R+t+t+ ql++L+ l++   ++yp+ e+++e+  +l    ++++++V++WFqN +a+
  Rmu_sc0006420.1_g000019.1  48 RWTPTPAQLRILQGLYYDkgHKYPTPEKIQEICLHLkpygQIEDKNVFFWFQNLKAR 104
                                9***************9557**********************************998 PP
2Wus_type_Homeobox84.89.5e-2846105361
          Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRe 61 
                                + RWtPtp Q++iL+ ly+ +G + P+ e+iq+i  +L+ yG+iedkNVf+WFQN kaR 
  Rmu_sc0006420.1_g000019.1  46 NIRWTPTPAQLRILQGLYYdKGHKYPTPEKIQEICLHLKPYGQIEDKNVFFWFQNLKARG 105
                                67***************9889**************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MEPRTLQLME LQTQQQMELQ AQQPTEEGGS TQAAGSSANT PIRPTNIRWT PTPAQLRILQ  60
GLYYDKGHKY PTPEKIQEIC LHLKPYGQIE DKNVFFWFQN LKARGQSFME QRGGDHQEVE  120
TLPLFPVHGE DVLGNPKITS EEGSAFGYYS GGLGGYNSGS PVSFELSLNP SGAADLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-18WOX family protein