PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006435.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 105aa    MW: 11841.4 Da    PI: 10.3947
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006435.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP882.2e-271182266
                        TCP  2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......s 66
                               + +kdrh k++T++g+Rd  vR  a++a++f+dLqd+LG+d++s + +WL+++ak+ai++l+         +
  Rmu_sc0006435.1_g000006.1 11 TSRKDRHNKVCTAKGPRDHHVRRAAHTAIQFYDLQDQLGYDRPSIAFDWLIKKAKAAIDKLPLWnpnsisvQ 82
                               789**********************************************************98854444431 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
MEARGYILRA TSRKDRHNKV CTAKGPRDHH VRRAAHTAIQ FYDLQDQLGY DRPSIAFDWL  60
IKKAKAAIDK LPLWNPNSIS VQTTSSPTVP ISAVQDTQNA SLHFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.28e-31TCP family protein