PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006452.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 210aa    MW: 23453.1 Da    PI: 6.686
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006452.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.7e-18113163255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +++GVr+++ +g+++AeIrdp +ng  +r++lg++ t+e+A  a+++a+ kl+g
  Rmu_sc0006452.1_g000008.1 113 HFRGVRRRP-WGKYAAEIRDPAKNG--ARVWLGTYETPEDAGLAYDRAAFKLRG 163
                                69*******.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MYGQTTLESV DSDLALLESI RQHLLGDHME PPATIFGGDV DDIIPLFFSS STAASTCLSG  60
LFTTENWWES ALKPEDSESE AVSTPEEEEV TLRKQAQNAS VKRDVHAPRV ERHFRGVRRR  120
PWGKYAAEIR DPAKNGARVW LGTYETPEDA GLAYDRAAFK LRGCKAKLNF PHLIGSNSVE  180
PVRVTPKRRR SPEQSSSASE DNESPKAKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-39ERF family protein