PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006455.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 124aa    MW: 14120 Da    PI: 9.2125
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006455.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP94.32.4e-292088170
                        TCP  1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa 70
                               a+g+kdr sk++T +g+Rd RvRl a++a++f+d+qd LG+d++s +++WL+++ak+ai++l+   ++++
  Rmu_sc0006455.1_g000002.1 20 ATGRKDRYSKVCTTKGPRDHRVRLAAHTAIQFYDVQDWLGYDRPSMAVDWLIKKAKAAIDKLPPW-NPNS 88
                               589***********************************************************998.2222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MMEESWDRRN REARGHILRA TGRKDRYSKV CTTKGPRDHR VRLAAHTAIQ FYDVQDWLGY  60
DRPSMAVDWL IKKAKAAIDK LPPWNPNSIS VQTTSSLTVP ISAAQDTERE PPFLDGGGSE  120
FFVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.26e-35TCP family protein