PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0006550.1_g000010.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 143aa MW: 15943.1 Da PI: 10.2803

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0006550.1_g000010.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	35.1	2.2e-11	3	40	23	56
SS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 p+ e+ ++++ +l +++ ++V++WFqN+Ra+ek Rmu_sc0006550.1_g000010.1 3 TSPTVEQVQRITLQLkwygQIENKNVFYWFQNQRAREK 40 579**********************************9 PP
2	Wus_type_Homeobox	63.2	5.5e-21	2	43	24	65
Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 + +P+ e++qrit +L+ yG+ie+kNVfyWFQN++aRe+ k+ Rmu_sc0006550.1_g000010.1 2 MTSPTVEQVQRITLQLKWYGQIENKNVFYWFQNQRAREKLKK 43 689************************************885 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MMTSPTVEQV QRITLQLKWY GQIENKNVFY WFQNQRAREK LKKKKLTSDV QVPKQRSRLV 60 SGSINLNFGS TSSADVGGSI MEQRGEDHQE IKILPLFPMH GEDIFGNMKT TSDGGGGHGG 120 GSHISLELSL SCEGKVGKSF RSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	4e-16	WOX family protein