PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0006688.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 313aa MW: 34567.4 Da PI: 7.3744

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0006688.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.3	4.6e-40	27	87	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+ Rmu_sc0006688.1_g000002.1 27 HDQSLKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA 87 68999*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MDSSSPLSGD ILTCSRPLIE RRLRPPHDQS LKCPRCDSTH TKFCYYNNYS LSQPRYFCKT 60 CRRYWTKGGT LRNIPVGGGC RKNKKVASKK PNEDHSPSMN PNHLGSSSSS SQHNPTDLQL 120 SFPDQMQFSH LNNLMLGAQG TGNPNFMDGR YGNINGMLEN SNQLRPIDFM ESKLEAIVGN 180 ARNYDFMGSG GDGLGMVGGL SNMGAHGLES GFHGFCSSPF GSMSLDHHGN NNGTNFMDTC 240 QRLMLPYEAN EDHHHHQNEI HDVKPNTKLL SLEWQDQGCS DAGKESSYGY LNGLGTWTGV 300 MNNYGPSTTN SLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	3e-54	Dof family protein