PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0006733.1_g000005.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 197aa MW: 22545.2 Da PI: 5.1077

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0006733.1_g000005.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	122.8	2.9e-38	8	127	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 lppGfrF Ptdeelvv++L++k++ +l+ +vi+++d+y ++Pw+L+ k+ +e k+wyf+s+r +nr+t+sgyWk Rmu_sc0006733.1_g000005.1 8 LPPGFRFFPTDEELVVHFLQRKAALLPLHP-DVIPDLDLYPYDPWELNGKALSEGKQWYFYSRRT--------QNRVTSSGYWK 82 79***********************999.99**********97777889***984........58***** PP NAM 85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 g++++v+s+ +++++g+k+ + fy g+ap+g kt+W+mheyrl Rmu_sc0006733.1_g000005.1 83 LLGTEEPVISStSNNKIGIKRYFGFYVGKAPSGIKTNWTMHEYRL 127 ****99877888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MADNPFQLPP GFRFFPTDEE LVVHFLQRKA ALLPLHPDVI PDLDLYPYDP WELNGKALSE 60 GKQWYFYSRR TQNRVTSSGY WKLLGTEEPV ISSTSNNKIG IKRYFGFYVG KAPSGIKTNW 120 TMHEYRLSAV SDTCASSSTP RSSKRRGHRK AVNEYSGYVL CRVYERGEDE DDDGTELSCL 180 DEVFLSLDDL DEISLPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	2e-73	NAC family protein