PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006763.1_g000018.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HSF
Protein Properties Length: 94aa    MW: 11179 Da    PI: 9.6975
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006763.1_g000018.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind47.25.9e-153584251
                               HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HH CS
               HSF_DNA-bind  2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfa 51
                               F  k++++++d++l+ +isw ++g+sfvv+d+ efa+ vLp+ Fkh+n++
  Rmu_sc0006763.1_g000018.1 35 FCAKTFDLVDDPSLDLIISWGSTGRSFVVWDPVEFARLVLPRNFKHNNLQ 84
                               999*********************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MVRRARLNLS VVGVAIMWEC RSRFSVCMRL RCRRFCAKTF DLVDDPSLDL IISWGSTGRS  60
FVVWDPVEFA RLVLPRNFKH NNLQREKEEK FDEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.15e-25HSF family protein