PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006792.1_g000018.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 95aa    MW: 10537.9 Da    PI: 11.2187
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006792.1_g000018.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP64.54e-204795149
                        TCP  1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktie 49
                               a+g+kdrhsk++T++g+Rd RvRl a++a++f+d qd+L + ++sk+++
  Rmu_sc0006792.1_g000018.1 47 ATGRKDRHSKVCTAKGPRDHRVRLAAHTAIQFYDAQDRLRYYRPSKAVD 95
                               589********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MKESHNNLHH RAMTSSSAAS LLGLGIRSAS SSTASEIVEA RGHILRATGR KDRHSKVCTA  60
KGPRDHRVRL AAHTAIQFYD AQDRLRYYRP SKAVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.27e-27TCP family protein