PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007034.1_g000015.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 252aa    MW: 27343.1 Da    PI: 4.8928
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007034.1_g000015.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox45.31.5e-1447106356
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 
                                +R+t+t+ ql++L+ l++    ++p+ e+++e+  +l    ++++++ ++WFqN +a+e+
  Rmu_sc0007034.1_g000015.1  47 HRWTPTPAQLRILQGLYYDkmLKNPTPEQIQEICLHLqqygQIEDKNLFFWFQNLKARER 106
                                8****************95569************************************98 PP
2Wus_type_Homeobox90.12.2e-2946108364
          Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                ++RWtPtp Q++iL+ ly+ + l++P+ e+iq+i  +L++yG+iedkN f+WFQN kaRer k
  Rmu_sc0007034.1_g000015.1  46 NHRWTPTPAQLRILQGLYYdKMLKNPTPEQIQEICLHLQQYGQIEDKNLFFWFQNLKARERLK 108
                                79***************9967789*************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MEPRTLQLME LQTQQQMELQ AQQPTQEGGS TQAAGSSANT PIRLTNHRWT PTPAQLRILQ  60
GLYYDKMLKN PTPEQIQEIC LHLQQYGQIE DKNLFFWFQN LKARERLKLR EFRNVRVGGS  120
LDLNFGSTSS ADDGRSIDLH FGSTGSTGTD GSIDLTFGSR VGYGIDPYSS SPFNANISTA  180
SFGPTGGQSS MEQRGGDHQE VETLPLFPVH GENVPGEGNA FSYYSGGSGS HNSGSPVSLE  240
LSPNPSGAAD LA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.15e-22WOX family protein