PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007076.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 177aa    MW: 19975.7 Da    PI: 10.2901
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007076.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox46.27.9e-153090256
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                               r+R+ +t++ +++L+elF++   r p+ e+++++  +l    +++ ++V++WF N+Ra+ek
  Rmu_sc0007076.1_g000001.1 30 RTRWIPTTDHIRILKELFYNkgVRSPTIEQIQRICLQLkwygKIEFKNVYFWFVNQRAREK 90
                               89*****************7789*************************************9 PP
2Wus_type_Homeobox83.32.8e-272992264
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                               +rtRW Pt++ i+iL+el++ +G+r+P+ e+iqri  +L+ yGkie kNV++WF N++aRe+ k
  Rmu_sc0007076.1_g000001.1 29 SRTRWIPTTDHIRILKELFYnKGVRSPTIEQIQRICLQLKWYGKIEFKNVYFWFVNQRAREKLK 92
                               789**************98769***************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MEPQKRHPTE DGGSNKAAGS SANMLRRESR TRWIPTTDHI RILKELFYNK GVRSPTIEQI  60
QRICLQLKWY GKIEFKNVYF WFVNQRAREK LKSNKLTSDV QVPKQRSGLV GGSIMEQPGD  120
DHQEIKTLPL FPMQSEDIFG NMKTTSDGGG GHGGGSYISL ELSLSCEGKA GKSFRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.15e-24WOX family protein