PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0007111.1_g000017.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bHLH

Protein Properties

Length: 241aa MW: 27521.8 Da PI: 7.1523

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0007111.1_g000017.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31	4.5e-10	199	228	1	30
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPka 30 +r++h ++Er+RR+++N+ ++ Lr+l+P++ Rmu_sc0007111.1_g000017.1 199 QRMTHIAVERNRRRQMNDHLNGLRSLMPPS 228 79**************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MERLQGPINP CFFGDHLDLQ CLEQGFTTTH GLRFEEEEAL YLSGLEDRMP FLQMLQSIDF 60 PPCDFTQKEP SFQALLRLQH KTGTTWPEME NTQSSQIHTL EALESCVTQD NQQQLYSPAK 120 SEGRDPHQNP LSVSGTLEGG GGVSSDCNRE MQQLNSAKMG PNQTLQTQFT KSASSPATRE 180 RRKRKRTRPT KNKEEVESQR MTHIAVERNR RRQMNDHLNG LRSLMPPSYI QRVITNCGNQ 240 I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	181	186	RRKRKR
2	200	211	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	4e-20	bHLH family protein