PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007177.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 133aa    MW: 15376.9 Da    PI: 9.3484
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007177.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.61.2e-10128152123
                        NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvm 123
                                ++ee+ +yfF++r+k +++ k+  r++ sg+W+a+ +++ v + ++++vg+k+ + +  g +p+ ++  W++
  Rmu_sc0007177.1_g000007.1  12 EEEEQPLYFFTHRKKLNPKAKKFDRKVGSGTWSAQYSKNVVAA-DDSVVGIKREFRYEGGFDPH-QNGAWLL 81 
                                3345577***************************998666666.999**********9888887.7888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MFHAQSISIM KEEEEQPLYF FTHRKKLNPK AKKFDRKVGS GTWSAQYSKN VVAADDSVVG  60
IKREFRYEGG FDPHQNGAWL LLMIVLLFPY YCLNFFWSND QKPTVHLLQT VTSPESYMQG  120
LATLVVIVKI MPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.12e-06NAC family protein