PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007180.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 232aa    MW: 26646.9 Da    PI: 7.7827
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007180.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.71.4e-1678224290
                       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................................... 47 
                                fY  Y+  +GFs rk+k  ++ + + +++r++vCskeg+r+++ k                                       
  Rmu_sc0007180.1_g000003.1  78 FYAYYSLAMGFSFRKEKLCRN-TAQVVVRRQLVCSKEGERKKRGKPdpsfaseiiscaqnlspphgtkqvckrktvnqkpived 160
                                9*****************999.7777*****************9999************************************* PP

                       FAR1  48 ....................tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                                                    ++++  +r+ tr +C+a++  ++ k +g+++v ++ +eHnH+la
  Rmu_sc0007180.1_g000003.1 161 adrrsmkrsgkqsgevehgkKRQRPPQRNITRGNCQARIIARRCKeSGVFRVVQFITEHNHALA 224
                                ***************9987555555699***************999****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MDESGMRFSE PNYHGWLVDE DDFSDEYEEL FSDEEASQSA NMDENLDCLH FNGKKYEDLR  60
SSDMIGVEFS SVEAVDTFYA YYSLAMGFSF RKEKLCRNTA QVVVRRQLVC SKEGERKKRG  120
KPDPSFASEI ISCAQNLSPP HGTKQVCKRK TVNQKPIVED ADRRSMKRSG KQSGEVEHGK  180
KRQRPPQRNI TRGNCQARII ARRCKESGVF RVVQFITEHN HALATTEFVP FL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163169RRSMKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.15e-07FAR1 family protein