PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007217.1_g000011.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 270aa    MW: 30583.9 Da    PI: 4.6365
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007217.1_g000011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1362.4e-4281371128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                                +p+G++FhP+deel+++yL++k + k+ +++ +i+e+d++k+eP++Lp  +++  e++wyfF++rd ky++++r+n +t +g+W
  Rmu_sc0007217.1_g000011.1   8 VPKGYQFHPSDEELLSHYLEEKNQCKDSQITIIIPEIDVCKHEPHELPeLAFTRAERKWYFFTPRDYKYNNSTRSNTTTGEGFW 91 
                                589***************************999***************557777899*************************** PP

                        NAM  84 katgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                k tgkd+++++  +++++g k+tL+fyk    k++kt+Wv+hey l
  Rmu_sc0007217.1_g000011.1  92 KITGKDRAIKAPgSKAVIGRKRTLTFYKRGVLKSQKTNWVIHEYYL 137
                                ***********9666779*********9999999**********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MSCGDFTVPK GYQFHPSDEE LLSHYLEEKN QCKDSQITII IPEIDVCKHE PHELPELAFT  60
RAERKWYFFT PRDYKYNNST RSNTTTGEGF WKITGKDRAI KAPGSKAVIG RKRTLTFYKR  120
GVLKSQKTNW VIHEYYLIQA HSDPPKQIGD FVICCLKYKS DNSDYDKDAP FCNQGSSSCS  180
MASNVENQAE ENRASEELVN VVPIPSGNDD ETGAGMITEE EEYLTLEEVE DILQIPIGNP  240
HELEGTQTDP CHLDKNDLSS SVEGQADRSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.19e-38NAC family protein