PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007217.1_g000012.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 102aa    MW: 12049.9 Da    PI: 10.961
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007217.1_g000012.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM74.42.7e-2378452128
                        NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                 a++kew+fF++   ky++++r+nr++k+gyWk tgk++ ++++ +++++g k+tL+fy+ r pk++kt+Wv+ ey l
  Rmu_sc0007217.1_g000012.1   7 GAQDKEWFFFTRMYYKYNKSSRSNRSAKKGYWKITGKERGIKARrSKAVIGSKRTLTFYQDRVPKSNKTSWVILEYYL 84 
                                46889*************************************98566779**************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MLGTDTGAQD KEWFFFTRMY YKYNKSSRSN RSAKKGYWKI TGKERGIKAR RSKAVIGSKR  60
TLTFYQDRVP KSNKTSWVIL EYYLPGNGVI SYLKRLDISR LF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15170.15e-17NAC family protein